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Preview at https://biojulia.github.io/BioTutorials/31 |
kescobo
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Mar 24, 2026
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| `NCBIBlast.jl` is a thin wrapper around the BLAST command line tool, | ||
| allowing users to run the tool within Julia. | ||
| The following BLAST tools are supported by `NCBIBlast`: | ||
| - `blastn` | ||
| - `blastp` | ||
| - `tblastn` | ||
| - `blastx` | ||
| - `makeblastdb` |
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It might be nice to add to this section that a benefit of using the package is that it uses Julia's powerful BinaryBuilder.jl architechture to bundle the BLAST+ executables so that you don't have to deal with that. In other words, if you do add NCBIBLAST, you don't need to have the command line tools available.
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I'll definitely add that! That is a huge plus!
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Preview at https://biojulia.github.io/BioTutorials/31 |
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Final cookbook tutorial (for now) giving examples of how to use
NCBIBLAST.jl.